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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923663.1_cds_XP_016472215.1_64471
CDS Infomation

[gene=LOC107794250] [db_xref=GeneID:107794250] [protein=diaminopimelate decarboxylase 1, chloroplastic-like] [protein_id=XP_016472215.1] [location=join(10182..10648,11782..11956,13197..13346,15138..15299,16013..16198,16825..16947,17059..17148,17950..18030)] [gbkey=CDS]
Sequence

ATGGCGGCGCACCTTGTCTCTCAAATCTCTCCATCACTTCCCAAATCTCTCAAATACCCT
TCAAACCCAAAGCTCTCATTTTTCAATCCCCTTTTACCACTGAAACCCATCTCAAGATAT
TTAAGCAGAGCTGCTGTATCAGCTTCCGAACCCCAAACTCAGAAATTTCAGCACTGTTTC
AAGAAATCTGGAGATGGGTTTTTGTATTGTGAGGGTGTTAAGGTTGAAGATGTTATGGAA
ACTGTGGAAAGAAGGCCTTTTTATTTGTATAGTAAGCCCCAAATTACTAGGAACGTTGAG
GCTTATAAGGCTGCTTTAGAGGGATTGAATTCGATTATTGGTTATGCTATTAAGGCCAAT
AATAATCTCAAGATTTTGGAACATTTGAGAGGGCTTGGTTGTGGGGCTGTTTTGGTTAGT
GGGAATGAGCTCAAGTTGGCTCTTCTTGCTGGATTTGATCCTACCAAGTGTATTTTTAAT
GGAAATGGGAAGCTGTTGGAGGACCTAGTGCTAGCTGCCCAAGAAGGTGTATTTGTAAAC
ATCGACAGTGAATTTGACTTGGATAACATTGTAGCAGCTGCAAGGATTTCTGGGAAGAAG
GTTAACGTGCTACTCAGGATTAATCCAGATGTGGATCCTCAGGTTCATCCTTATGTTGCC
ACTGGAAATAAGAGCTCCAAATTTGGCATCAGAAATGAAAAGCTTCAATGGTTTCTAGAT
GCTGTCAAGGCACATCCGCAGGAATTGAAACTTGTTGGAGCTCATTGTCATCTTGGGTCA
ACTATCACCAAGGTAGACATTTTTCGAGATGCAGCTGTCTTGATGGTGAACTACATTGAT
GAAATTCGATCCCAAGGATTTGAAATCAATTACCTGAACATTGGAGGTGGCTTAGGAATT
GATTACTATCATTCTGGAGCTGTCCTTCCGTCACCTAGAGATCTTATTGATACGGTCCGA
GAATTAGTCCTCTCACGGAAGCTCAATCTCATTATTGAACCCGGAAGATCACTAATTGCA
AACACATGCTGTTTGGTTAACAGAGTTACTGGAGTTAAAACCAATGGGACCAAAAACTTT
ATTGTGATTGATGGTAGCATGGCAGAGCTTATACGTCCAAGTCTTTATGATGCTTATCAG
CACATAGAGCTTGTTTCCCCTCCACCTCCAGAAGCTGCGATTTCTAGGTTTGATGTTGTT
GGTCCTGTATGTGAATCTGCAGATTTCCTGGGAAAGGACCGGGAACTTCCCGCCCCTACT
AGGGGCACTGGTCTGGTAGTTCATGATGCAGGAGCTTACTGCATGAGTATGGCATCAACT
TACAATCTCAAGATGCGACCACCTGAGTACTGGGTGGAAGAAGATGGATCAATATCCAAA
ATCCGGCATGGGGAGACATTTGAAGACCATTTGAGATTCTTTGAGGGTTTGTAA

Peptide Sequence

PEP ID

XP_016472215.1
PEP Infomation

PREDICTED: diaminopimelate decarboxylase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAAHLVSQISPSLPKSLKYPSNPKLSFFNPLLPLKPISRYLSRAAVSASEPQTQKFQHCF
KKSGDGFLYCEGVKVEDVMETVERRPFYLYSKPQITRNVEAYKAALEGLNSIIGYAIKAN
NNLKILEHLRGLGCGAVLVSGNELKLALLAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVN
IDSEFDLDNIVAAARISGKKVNVLLRINPDVDPQVHPYVATGNKSSKFGIRNEKLQWFLD
AVKAHPQELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDEIRSQGFEINYLNIGGGLGI
DYYHSGAVLPSPRDLIDTVRELVLSRKLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNF
IVIDGSMAELIRPSLYDAYQHIELVSPPPPEAAISRFDVVGPVCESADFLGKDRELPAPT
RGTGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSISKIRHGETFEDHLRFFEGL

Transcript Sequence

Gene sequence data has not been registered.